• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
EFN91358.1 protein (Prevotella amnii) - STRING interaction network
"EFN91358.1" - Polysaccharide biosynthesis/export protein in Prevotella amnii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFN91358.1Polysaccharide biosynthesis/export protein; Identified by match to protein family HMM PF02563 (261 aa)    
Predicted Functional Partners:
EFN90355.1
Chain length determinant protein; Identified by match to protein family HMM PF02706; match to protein family HMM TIGR01007 (832 aa)
 
  0.999
EFN90310.1
Bacterial sugar transferase; Identified by match to protein family HMM PF02397 (202 aa)
 
 
  0.886
glmS
Glutamine--fructose-6-phosphate aminotransferase [isomerizing]; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source (615 aa)
              0.788
EFN91273.1
Class II glutamine amidotransferase; Identified by match to protein family HMM PF00310 (637 aa)
              0.733
EFN91013.1
Sugar isomerase, KpsF/GutQ family; Identified by match to protein family HMM PF00571; match to protein family HMM PF01380; match to protein family HMM TIGR00393; Belongs to the SIS family. GutQ/KpsF subfamily (324 aa)
         
  0.726
EFN91950.1
Low molecular weight phosphotyrosine protein phosphatase; Identified by match to protein family HMM PF01451; Belongs to the low molecular weight phosphotyrosine protein phosphatase family (164 aa)
 
   
  0.694
carA
Carbamoyl-phosphate synthase small chain; Identified by match to protein family HMM PF00117; match to protein family HMM PF00988; match to protein family HMM TIGR01368; Belongs to the CarA family (358 aa)
              0.692
carB
Carbamoyl-phosphate synthase (glutamine-hydrolyzing); Identified by match to protein family HMM PF00289; match to protein family HMM PF02142; match to protein family HMM PF02222; match to protein family HMM PF02786; match to protein family HMM PF02787; match to protein family HMM PF08443; match to protein family HMM TIGR01369 (1074 aa)
              0.673
mrp
Iron-sulfur cluster carrier protein; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP (366 aa)
   
  0.600
pheT
Phenylalanine--tRNA ligase beta subunit; Identified by match to protein family HMM PF01588; match to protein family HMM PF03147; match to protein family HMM PF03483; match to protein family HMM PF03484; match to protein family HMM TIGR00472; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily (822 aa)
   
   
  0.598
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 679191
Other names: P. amnii CRIS 21A-A, Prevotella amnii, Prevotella amnii CRIS 21A-A, Prevotella amnii str. CRIS 21A-A, Prevotella amnii strain CRIS 21A-A
Server load: low (7%) [HD]