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HMPREF9018_0816 protein (Prevotella amnii) - STRING interaction network
"HMPREF9018_0816" - Putative oxygen-independent coproporphyrinogen III oxidase in Prevotella amnii
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Known Interactions
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experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
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textmining
co-expression
protein homology
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Score
HMPREF9018_0816Putative oxygen-independent coproporphyrinogen III oxidase (381 aa)    
Predicted Functional Partners:
hemN
Coproporphyrinogen-III oxidase (454 aa)
 
 
0.862
hemG
Protoporphyrinogen oxidase (458 aa)
   
 
  0.840
prmC
Protein-(Glutamine-N5) methyltransferase, release factor-specific (286 aa)
   
 
    0.804
HMPREF9018_0817
Uncharacterized protein (110 aa)
              0.738
HMPREF9018_0243
Putative 3-oxoacyl-(Acyl carrier protein) synthase III (378 aa)
       
    0.668
nifJ
Pyruvate-flavodoxin oxidoreductase ; Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin (1191 aa)
         
  0.642
rlmN
tRNA m2A37 methyltransferase ; Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs (347 aa)
 
   
  0.607
miaB
tRNA-i(6)A37 methylthiotransferase ; Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine (442 aa)
 
   
  0.597
pnp
Polynucleotide phosphorylase ; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3’- to 5’-direction (751 aa)
 
        0.566
topA
DNA topoisomerase I ; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5’-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3’-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...] (782 aa)
 
   
  0.563
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 679191
Other names: P. amnii, P. amnii CRIS 21A-A, Prevotella amnii, Prevotella amnii CRIS 21A-A, Prevotella amnii Lawson et al. 2008, Prevotella amnii str. CRIS 21A-A, Prevotella amnii strain CRIS 21A-A
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