STRINGSTRING
HMPREF9018_0836 protein (Prevotella amnii) - STRING interaction network
"HMPREF9018_0836" - Uncharacterized protein in Prevotella amnii
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HMPREF9018_0836Uncharacterized protein (355 aa)    
Predicted Functional Partners:
HMPREF9018_0833
Tetratricopeptide repeat protein (861 aa)
 
          0.953
HMPREF9018_0837
Uncharacterized protein (290 aa)
 
          0.927
HMPREF9018_0835
Von Willebrand factor type A domain protein (318 aa)
 
          0.915
HMPREF9018_0834
Von Willebrand factor type A domain protein (566 aa)
 
          0.908
HMPREF9018_0838
ATPase family associated with various cellular activities (AAA) (331 aa)
              0.852
HMPREF9018_1878
Uncharacterized protein (336 aa)
   
          0.765
HMPREF9018_0262
Outer membrane protein transport protein, Ompp1/FadL/TodX family (435 aa)
   
          0.719
HMPREF9018_1632
RNA methyltransferase, RsmD family (176 aa)
   
          0.688
HMPREF9018_1579
Sporulation and cell division repeat protein (323 aa)
   
          0.680
HMPREF9018_1835
TonB-linked outer membrane protein, SusC/RagA family (1069 aa)
   
          0.670
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 679191
Other names: P. amnii, P. amnii CRIS 21A-A, Prevotella amnii, Prevotella amnii CRIS 21A-A, Prevotella amnii Lawson et al. 2008, Prevotella amnii str. CRIS 21A-A, Prevotella amnii strain CRIS 21A-A
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