STRINGSTRING
HMPREF9018_0839 protein (Prevotella amnii) - STRING interaction network
"HMPREF9018_0839" - DNA-binding protein HU in Prevotella amnii
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HMPREF9018_0839DNA-binding protein HU (424 aa)    
Predicted Functional Partners:
HMPREF9018_0840
DNA-binding protein HU (96 aa)
              0.792
rimO
Ribosome maturation factor RimO ; Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12 (432 aa)
              0.770
ftsY
Signal recognition particle receptor FtsY ; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC) (317 aa)
              0.682
HMPREF9018_0838
ATPase family associated with various cellular activities (AAA) (331 aa)
              0.536
HMPREF9018_0837
Uncharacterized protein (290 aa)
              0.497
HMPREF9018_0836
Uncharacterized protein (355 aa)
              0.497
HMPREF9018_0835
Von Willebrand factor type A domain protein (318 aa)
              0.480
HMPREF9018_0834
Von Willebrand factor type A domain protein (566 aa)
              0.426
HMPREF9018_0833
Tetratricopeptide repeat protein (861 aa)
              0.426
HMPREF9018_0830
Uncharacterized protein (408 aa)
 
          0.402
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 679191
Other names: P. amnii, P. amnii CRIS 21A-A, Prevotella amnii, Prevotella amnii CRIS 21A-A, Prevotella amnii Lawson et al. 2008, Prevotella amnii str. CRIS 21A-A, Prevotella amnii strain CRIS 21A-A
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