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rimO protein (Prevotella amnii) - STRING interaction network
"rimO" - Ribosome maturation factor RimO in Prevotella amnii
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second shell of interactors
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filled nodes:
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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rimORibosome maturation factor RimO ; Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12 (432 aa)    
Predicted Functional Partners:
ftsY
Signal recognition particle receptor FtsY ; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC) (317 aa)
   
        0.859
HMPREF9018_0840
DNA-binding protein HU (96 aa)
              0.845
HMPREF9018_0839
DNA-binding protein HU (424 aa)
              0.770
secD
Export membrane protein SecD ; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA (1008 aa)
   
   
  0.651
guaA
Glutamine amidotransferase ; Catalyzes the synthesis of GMP from XMP (514 aa)
   
        0.584
HMPREF9018_0831
S-adenosylmethionine-tRNA ribosyltransferase-isomerase ; Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA) (423 aa)
   
   
  0.575
guaB
Inosine-5’-monophosphate dehydrogenase (494 aa)
   
        0.553
dnaJ
Chaperone protein DnaJ ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, [...] (382 aa)
   
      0.522
dnaK
Heat shock protein 70 ; Acts as a chaperone (633 aa)
   
 
  0.520
def
Polypeptide deformylase ; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions (186 aa)
 
   
  0.519
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 679191
Other names: P. amnii, P. amnii CRIS 21A-A, Prevotella amnii, Prevotella amnii CRIS 21A-A, Prevotella amnii Lawson et al. 2008, Prevotella amnii str. CRIS 21A-A, Prevotella amnii strain CRIS 21A-A
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