STRINGSTRING
serC protein (Prevotella amnii) - STRING interaction network
"serC" - Phosphohydroxythreonine aminotransferase in Prevotella amnii
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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serCPhosphohydroxythreonine aminotransferase ; Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine (358 aa)    
Predicted Functional Partners:
HMPREF9018_0897
4-phosphoerythronate dehydrogenase (305 aa)
 
  0.999
HMPREF9018_1146
4-phosphoerythronate dehydrogenase (323 aa)
       
  0.981
pdxA
Pyridoxal phosphate biosynthetic protein PdxA (366 aa)
         
  0.971
HMPREF9018_0185
Putative HAD hydrolase, family IB (198 aa)
   
 
  0.881
HMPREF9018_0206
Peptidase dimerization domain protein (453 aa)
       
  0.719
HMPREF9018_0898
Uncharacterized protein (415 aa)
              0.617
gyrA
DNA gyrase subunit A ; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner (854 aa)
 
   
  0.602
aroA
5-enolpyruvylshikimate-3-phosphate synthase ; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3- phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate (418 aa)
   
   
  0.591
polA
DNA-directed DNA polymerase (945 aa)
     
   
  0.514
HMPREF9018_0895
DEAD/DEAH box helicase (438 aa)
   
        0.513
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 679191
Other names: P. amnii, P. amnii CRIS 21A-A, Prevotella amnii, Prevotella amnii CRIS 21A-A, Prevotella amnii Lawson et al. 2008, Prevotella amnii str. CRIS 21A-A, Prevotella amnii strain CRIS 21A-A
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