STRINGSTRING
HMPREF9018_0898 protein (Prevotella amnii) - STRING interaction network
"HMPREF9018_0898" - Uncharacterized protein in Prevotella amnii
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HMPREF9018_0898Uncharacterized protein (415 aa)    
Predicted Functional Partners:
HMPREF9018_0899
Putative YigZ family protein (197 aa)
              0.767
HMPREF9018_0897
4-phosphoerythronate dehydrogenase (305 aa)
              0.706
serC
Phosphohydroxythreonine aminotransferase ; Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine (358 aa)
              0.617
HMPREF9018_1708
7TM receptor with intracellular HD hydrolase (689 aa)
 
          0.488
HMPREF9018_1403
Pyridoxal phosphate enzyme, YggS family (223 aa)
 
          0.485
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 679191
Other names: P. amnii, P. amnii CRIS 21A-A, Prevotella amnii, Prevotella amnii CRIS 21A-A, Prevotella amnii Lawson et al. 2008, Prevotella amnii str. CRIS 21A-A, Prevotella amnii strain CRIS 21A-A
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