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HMPREF9018_0925 protein (Prevotella amnii) - STRING interaction network
"HMPREF9018_0925" - Peptidase, S49 (Protease IV) family protein in Prevotella amnii
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HMPREF9018_0925Peptidase, S49 (Protease IV) family protein (274 aa)    
Predicted Functional Partners:
HMPREF9018_0926
Uncharacterized protein (666 aa)
              0.798
HMPREF9018_0922
DNA primase ; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication (1319 aa)
 
     
  0.771
HMPREF9018_0924
Uncharacterized protein (40 aa)
              0.665
polA
DNA-directed DNA polymerase (945 aa)
   
   
  0.586
cysK
Cysteine synthase (315 aa)
     
      0.577
thiL
Thiamine-phosphate kinase (369 aa)
       
    0.567
HMPREF9018_0927
Uncharacterized protein (333 aa)
              0.564
HMPREF9018_0958
Site-specific recombinase, phage integrase family (405 aa)
   
          0.516
HMPREF9018_0930
Methyltransferase (441 aa)
 
          0.511
cmk
Cytidine monophosphate kinase (230 aa)
 
          0.496
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 679191
Other names: P. amnii, P. amnii CRIS 21A-A, Prevotella amnii, Prevotella amnii CRIS 21A-A, Prevotella amnii Lawson et al. 2008, Prevotella amnii str. CRIS 21A-A, Prevotella amnii strain CRIS 21A-A
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