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STRINGSTRING
EFN91242.1 protein (Prevotella amnii) - STRING interaction network
"EFN91242.1" - annotation not available in Prevotella amnii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFN91242.1annotation not available (179 aa)    
Predicted Functional Partners:
EFN91249.1
annotation not available (146 aa)
              0.884
EFN91959.1
Uncharacterized protein; This gene contains a nucleotide ambiguity which may be the result of a sequencing error (460 aa)
   
          0.561
EFN90964.1
Transposase, IS4 family; Identified by match to protein family HMM PF01609 (428 aa)
   
          0.484
EFN91396.1
Uncharacterized protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain one or more premature stops and/or frameshifts (215 aa)
   
          0.464
EFN91241.1
annotation not available (91 aa)
              0.410
EFN90354.1
annotation not available (467 aa)
   
          0.401
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 679191
Other names: P. amnii CRIS 21A-A, Prevotella amnii, Prevotella amnii CRIS 21A-A, Prevotella amnii str. CRIS 21A-A, Prevotella amnii strain CRIS 21A-A
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