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HMPREF9018_0978 protein (Prevotella amnii) - STRING interaction network
"HMPREF9018_0978" - RNA pseudouridine synthase in Prevotella amnii
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second shell of interactors
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proteins of unknown 3D structure
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Gene Fusion
Cooccurence
Coexpression
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Textmining
[Homology]
Score
HMPREF9018_0978RNA pseudouridine synthase (235 aa)    
Predicted Functional Partners:
HMPREF9018_1134
Pseudouridine synthase (528 aa)
 
  0.812
coaD
Pantetheine-phosphate adenylyltransferase ; Reversibly transfers an adenylyl group from ATP to 4’- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate (150 aa)
       
    0.800
fabG
3-oxoacyl-[acyl-carrier-protein] reductase (250 aa)
              0.713
HMPREF9018_1090
Kinase, PfkB family (310 aa)
   
 
    0.711
truA
tRNA-uridine isomerase I ; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs (257 aa)
 
   
  0.698
HMPREF9018_1294
Phosphorylase family (291 aa)
   
 
    0.694
ribD
Riboflavin biosynthesis protein RibD (313 aa)
   
    0.639
truB
tRNA-uridine isomerase ; Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs (233 aa)
 
   
  0.597
HMPREF9018_0308
DNA-directed DNA polymerase (1241 aa)
 
   
  0.597
HMPREF9018_0980
Transcriptional regulator, TetR family (206 aa)
              0.578
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 679191
Other names: P. amnii, P. amnii CRIS 21A-A, Prevotella amnii, Prevotella amnii CRIS 21A-A, Prevotella amnii Lawson et al. 2008, Prevotella amnii str. CRIS 21A-A, Prevotella amnii strain CRIS 21A-A
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