STRINGSTRING
HMPREF9018_0989 protein (Prevotella amnii) - STRING interaction network
"HMPREF9018_0989" - PhoH family protein in Prevotella amnii
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HMPREF9018_0989PhoH family protein (321 aa)    
Predicted Functional Partners:
purC
SAICAR synthetase (316 aa)
              0.837
menG
Demethylmenaquinone methyltransferase ; Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) (244 aa)
              0.693
HMPREF9018_0992
Putative shikimate dehydrogenase (249 aa)
              0.676
HMPREF9018_0988
Uncharacterized protein (254 aa)
              0.642
ybeY
Endoribonuclease YbeY ; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3’ terminus of the 16S rRNA (144 aa)
   
 
  0.636
HMPREF9018_0987
Uncharacterized protein (90 aa)
              0.614
HMPREF9018_0771
MATE efflux family protein (456 aa)
     
      0.589
HMPREF9018_0720
MATE efflux family protein (454 aa)
     
      0.589
HMPREF9018_2008
MATE efflux family protein (444 aa)
     
      0.589
HMPREF9018_1714
MATE efflux family protein (450 aa)
     
      0.589
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 679191
Other names: P. amnii, P. amnii CRIS 21A-A, Prevotella amnii, Prevotella amnii CRIS 21A-A, Prevotella amnii Lawson et al. 2008, Prevotella amnii str. CRIS 21A-A, Prevotella amnii strain CRIS 21A-A
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