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prfA protein (Prevotella amnii) - STRING interaction network
"prfA" - Peptide chain release factor 1 in Prevotella amnii
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
prfAPeptide chain release factor 1 ; Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA (370 aa)    
Predicted Functional Partners:
prmC
Protein-(Glutamine-N5) methyltransferase, release factor-specific (286 aa)
 
  0.994
HMPREF9018_1079
Phosphoribulokinase/uridine kinase family protein (553 aa)
   
 
  0.921
frr
Ribosome-releasing factor ; Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another (186 aa)
 
 
  0.917
rplQ
50S ribosomal protein L17 (160 aa)
 
 
  0.899
HMPREF9018_1828
Putative peptide chain release factor 2 (374 aa)
 
0.893
rplM
50S ribosomal protein L13 ; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly (154 aa)
 
 
  0.874
rpsI
30S ribosomal protein S9 (128 aa)
   
 
  0.859
rplP
50S ribosomal protein L16 ; Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs (142 aa)
 
 
  0.850
rplD
50S ribosomal protein L4 ; Forms part of the polypeptide exit tunnel (209 aa)
 
  0.849
rpsP
30S ribosomal protein S16 (171 aa)
   
 
  0.843
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 679191
Other names: P. amnii, P. amnii CRIS 21A-A, Prevotella amnii, Prevotella amnii CRIS 21A-A, Prevotella amnii Lawson et al. 2008, Prevotella amnii str. CRIS 21A-A, Prevotella amnii strain CRIS 21A-A
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