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ribH protein (Prevotella amnii) - STRING interaction network
"ribH" - 6,7-dimethyl-8-ribityllumazine synthase in Prevotella amnii
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second shell of interactors
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proteins of unknown 3D structure
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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ribH6,7-dimethyl-8-ribityllumazine synthase ; Catalyzes the formation of 6,7-dimethyl-8- ribityllumazine by condensation of 5-amino-6-(D- ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin (158 aa)    
Predicted Functional Partners:
ribB
Riboflavin biosynthesis protein RibBA ; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate (402 aa)
 
  0.999
ribE
Riboflavin synthase, alpha subunit (201 aa)
  0.999
ribD
Riboflavin biosynthesis protein RibD (313 aa)
 
  0.986
HMPREF9018_1530
Cof-like hydrolase (285 aa)
       
    0.973
HMPREF9018_0999
Tetratricopeptide repeat protein (224 aa)
              0.880
ribF
Riboflavin biosynthesis protein (313 aa)
   
 
  0.854
HMPREF9018_1290
Cof-like hydrolase (262 aa)
       
    0.790
recF
DNA replication and repair protein RecF ; The RecF protein is involved in DNA metabolism; it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP (368 aa)
              0.743
HMPREF9018_1356
Haloacid dehalogenase-like hydrolase (234 aa)
       
    0.706
smpB
Small protein B ; Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene; the 2 termini fold to resemble tRNA(Ala) and it encodes a "tag peptide", a short internal open reading frame. During trans-translation Ala- aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to tra [...] (159 aa)
       
  0.693
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 679191
Other names: P. amnii, P. amnii CRIS 21A-A, Prevotella amnii, Prevotella amnii CRIS 21A-A, Prevotella amnii Lawson et al. 2008, Prevotella amnii str. CRIS 21A-A, Prevotella amnii strain CRIS 21A-A
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