STRINGSTRING
HMPREF9018_1014 protein (Prevotella amnii) - STRING interaction network
"HMPREF9018_1014" - Outer membrane protein in Prevotella amnii
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HMPREF9018_1014Outer membrane protein (167 aa)    
Predicted Functional Partners:
yaeT
Outer membrane protein assembly complex, YaeT protein (871 aa)
 
          0.797
HMPREF9018_1015
Outer membrane protein (172 aa)
 
          0.795
uppS
Isoprenyl transferase ; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids (252 aa)
              0.734
HMPREF9018_1018
BNR/Asp-box repeat protein (445 aa)
 
          0.647
murI
Glutamate racemase ; Provides the (R)-glutamate required for cell wall biosynthesis (278 aa)
              0.628
HMPREF9018_0296
TonB-dependent receptor (294 aa)
   
          0.564
HMPREF9018_1704
Uncharacterized protein (73 aa)
   
          0.561
HMPREF9018_0622
TonB-dependent receptor (261 aa)
   
          0.549
HMPREF9018_1652
PASTA domain protein (255 aa)
   
          0.545
HMPREF9018_1013
Outer membrane protein (167 aa)
              0.543
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 679191
Other names: P. amnii, P. amnii CRIS 21A-A, Prevotella amnii, Prevotella amnii CRIS 21A-A, Prevotella amnii Lawson et al. 2008, Prevotella amnii str. CRIS 21A-A, Prevotella amnii strain CRIS 21A-A
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