STRINGSTRING
yaeT protein (Prevotella amnii) - STRING interaction network
"yaeT" - Outer membrane protein assembly complex, YaeT protein in Prevotella amnii
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yaeTOuter membrane protein assembly complex, YaeT protein (871 aa)    
Predicted Functional Partners:
HMPREF9018_1015
Outer membrane protein (172 aa)
 
          0.902
uppS
Isoprenyl transferase ; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids (252 aa)
   
        0.871
lpxC
UDP-3-O-[R-3-hydroxymyristoyl]-N-acetylglucosamine deacetylase ; Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis (461 aa)
 
 
  0.856
HMPREF9018_0487
Peptidylprolyl isomerase (466 aa)
 
 
  0.856
HMPREF9018_1014
Outer membrane protein (167 aa)
 
          0.797
HMPREF9018_1680
Efflux ABC transporter, permease protein (410 aa)
 
        0.751
HMPREF9018_0198
Zinc metalloprotease (466 aa)
 
   
  0.750
HMPREF9018_1723
Uncharacterized protein (215 aa)
   
          0.730
HMPREF9018_1898
Efflux ABC transporter, permease protein (416 aa)
 
        0.722
HMPREF9018_0404
Putative zinc ribbon domain protein (274 aa)
   
          0.716
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 679191
Other names: P. amnii, P. amnii CRIS 21A-A, Prevotella amnii, Prevotella amnii CRIS 21A-A, Prevotella amnii Lawson et al. 2008, Prevotella amnii str. CRIS 21A-A, Prevotella amnii strain CRIS 21A-A
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