STRINGSTRING
HMPREF9018_1034 protein (Prevotella amnii) - STRING interaction network
"HMPREF9018_1034" - DNA in Prevotella amnii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HMPREF9018_1034DNA (Cytosine-5-)-methyltransferase (338 aa)    
Predicted Functional Partners:
HMPREF9018_1033
Tsp45I type II restriction enzyme (259 aa)
              0.866
HMPREF9018_0093
Type III restriction enzyme, res subunit (1022 aa)
 
 
 
  0.844
ruvB
Holliday junction ATP-dependent DNA helicase RuvB ; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing (345 aa)
              0.821
HMPREF9018_1032
Uncharacterized protein (296 aa)
              0.585
HMPREF9018_1665
Uncharacterized protein (565 aa)
 
          0.487
HMPREF9018_0491
DNA helicase (845 aa)
         
  0.404
HMPREF9018_0008
DNA helicase (892 aa)
         
  0.404
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 679191
Other names: P. amnii, P. amnii CRIS 21A-A, Prevotella amnii, Prevotella amnii CRIS 21A-A, Prevotella amnii Lawson et al. 2008, Prevotella amnii str. CRIS 21A-A, Prevotella amnii strain CRIS 21A-A
Server load: low (3%) [HD]