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rnc protein (Prevotella amnii) - STRING interaction network
"rnc" - Ribonuclease III in Prevotella amnii
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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rncRibonuclease III ; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism (266 aa)    
Predicted Functional Partners:
fabF
3-oxoacyl-[acyl-carrier-protein] synthase 2 ; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP (420 aa)
   
   
  0.920
rpsB
30S ribosomal protein S2 (266 aa)
 
 
  0.863
HMPREF9018_1330
DEAD/DEAH box helicase (567 aa)
   
  0.807
HMPREF9018_0079
DEAD/DEAH box helicase (613 aa)
   
  0.807
rplS
50S ribosomal protein L19 ; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site (119 aa)
   
 
  0.806
rpmB
50S ribosomal protein L28 (87 aa)
   
 
  0.806
HMPREF9018_0895
DEAD/DEAH box helicase (438 aa)
   
  0.805
HMPREF9018_1062
Acyl carrier protein ; Carrier of the growing fatty acid chain in fatty acid biosynthesis (78 aa)
   
   
  0.789
HMPREF9018_1327
S1 RNA binding domain protein (523 aa)
   
 
  0.784
rnz
tRNase Z ; Zinc phosphodiesterase, which displays some tRNA 3’- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3’-trailer from precursor tRNA (304 aa)
   
 
  0.778
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 679191
Other names: P. amnii, P. amnii CRIS 21A-A, Prevotella amnii, Prevotella amnii CRIS 21A-A, Prevotella amnii Lawson et al. 2008, Prevotella amnii str. CRIS 21A-A, Prevotella amnii strain CRIS 21A-A
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