STRINGSTRING
HMPREF9018_1069 protein (Prevotella amnii) - STRING interaction network
"HMPREF9018_1069" - Peptidase C1-like family in Prevotella amnii
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HMPREF9018_1069Peptidase C1-like family (348 aa)    
Predicted Functional Partners:
rnr
Ribonuclease R ; 3’-5’ exoribonuclease that releases 5’-nucleoside monophosphates and is involved in maturation of structured RNAs (761 aa)
              0.640
HMPREF9018_2058
LysM domain protein (458 aa)
   
          0.622
HMPREF9018_1081
Uncharacterized protein (706 aa)
   
          0.611
HMPREF9018_2030
Uncharacterized protein (330 aa)
   
          0.561
HMPREF9018_0170
Uncharacterized protein (312 aa)
   
          0.527
secG
Preprotein translocase, SecG subunit (122 aa)
   
          0.523
HMPREF9018_0676
Endonuclease/exonuclease/phosphatase family protein (315 aa)
   
          0.521
HMPREF9018_0262
Outer membrane protein transport protein, Ompp1/FadL/TodX family (435 aa)
   
          0.518
HMPREF9018_0273
Uncharacterized protein (78 aa)
   
          0.509
HMPREF9018_0997
Uncharacterized protein (96 aa)
   
          0.497
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 679191
Other names: P. amnii, P. amnii CRIS 21A-A, Prevotella amnii, Prevotella amnii CRIS 21A-A, Prevotella amnii Lawson et al. 2008, Prevotella amnii str. CRIS 21A-A, Prevotella amnii strain CRIS 21A-A
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