STRINGSTRING
HMPREF9018_1075 protein (Prevotella amnii) - STRING interaction network
"HMPREF9018_1075" - Uncharacterized protein in Prevotella amnii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HMPREF9018_1075Uncharacterized protein (205 aa)    
Predicted Functional Partners:
rpoN
RNA polymerase sigma-54 factor (503 aa)
              0.877
ispG
1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase ; Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate (636 aa)
 
          0.771
HMPREF9018_0601
Uncharacterized protein (222 aa)
   
          0.768
HMPREF9018_1842
Uncharacterized protein (204 aa)
   
          0.756
HMPREF9018_1903
Uncharacterized protein (219 aa)
   
          0.743
purE
5-(carboxyamino)imidazole ribonucleotide mutase ; Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR) (168 aa)
              0.735
HMPREF9018_1341
Uncharacterized protein (280 aa)
   
          0.729
HMPREF9018_0786
Uncharacterized protein (220 aa)
   
          0.721
HMPREF9018_0509
Uncharacterized protein (159 aa)
   
          0.718
HMPREF9018_0100
Uncharacterized protein (363 aa)
   
          0.704
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 679191
Other names: P. amnii, P. amnii CRIS 21A-A, Prevotella amnii, Prevotella amnii CRIS 21A-A, Prevotella amnii Lawson et al. 2008, Prevotella amnii str. CRIS 21A-A, Prevotella amnii strain CRIS 21A-A
Server load: low (12%) [HD]