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HMPREF9018_1079 protein (Prevotella amnii) - STRING interaction network
"HMPREF9018_1079" - Phosphoribulokinase/uridine kinase family protein in Prevotella amnii
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Neighborhood
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Cooccurence
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[Homology]
Score
HMPREF9018_1079Phosphoribulokinase/uridine kinase family protein (553 aa)    
Predicted Functional Partners:
HMPREF9018_1010
Putative cytidine deaminase (159 aa)
 
 
  0.990
HMPREF9018_0119
Uracil phosphoribosyltransferase (219 aa)
   
  0.983
rplC
50S ribosomal protein L3 ; One of the primary rRNA binding proteins, it binds directly near the 3’-end of the 23S rRNA, where it nucleates assembly of the 50S subunit (204 aa)
     
  0.971
rplT
50S ribosomal protein L20 ; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit (114 aa)
   
  0.965
pheT
Phenylalanyl-tRNA synthetase beta subunit (822 aa)
   
 
  0.958
rplD
50S ribosomal protein L4 ; Forms part of the polypeptide exit tunnel (209 aa)
     
  0.952
rplB
50S ribosomal protein L2 ; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome (275 aa)
     
  0.949
rplQ
50S ribosomal protein L17 (160 aa)
     
  0.945
rplS
50S ribosomal protein L19 ; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site (119 aa)
   
  0.941
rplO
50S ribosomal protein L15 ; Binds to the 23S rRNA (148 aa)
     
  0.939
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 679191
Other names: P. amnii, P. amnii CRIS 21A-A, Prevotella amnii, Prevotella amnii CRIS 21A-A, Prevotella amnii Lawson et al. 2008, Prevotella amnii str. CRIS 21A-A, Prevotella amnii strain CRIS 21A-A
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