STRINGSTRING
HMPREF9018_1083 protein (Prevotella amnii) - STRING interaction network
"HMPREF9018_1083" - Transporter gate domain protein in Prevotella amnii
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query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HMPREF9018_1083Transporter gate domain protein (408 aa)    
Predicted Functional Partners:
HMPREF9018_1082
Polysaccharide biosynthesis protein (486 aa)
              0.809
HMPREF9018_1081
Uncharacterized protein (706 aa)
              0.674
HMPREF9018_1134
Pseudouridine synthase (528 aa)
              0.568
ribB
Riboflavin biosynthesis protein RibBA ; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate (402 aa)
         
  0.564
HMPREF9018_1084
Uncharacterized protein (154 aa)
              0.510
ybeY
Endoribonuclease YbeY ; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3’ terminus of the 16S rRNA (144 aa)
              0.438
HMPREF9018_1514
Putative endoribonuclease L-PSP (124 aa)
              0.408
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 679191
Other names: P. amnii, P. amnii CRIS 21A-A, Prevotella amnii, Prevotella amnii CRIS 21A-A, Prevotella amnii Lawson et al. 2008, Prevotella amnii str. CRIS 21A-A, Prevotella amnii strain CRIS 21A-A
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