STRINGSTRING
dprA protein (Prevotella amnii) - STRING interaction network
"dprA" - DNA protecting protein DprA in Prevotella amnii
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dprADNA protecting protein DprA (376 aa)    
Predicted Functional Partners:
HMPREF9018_0346
Mg chelatase-like protein (515 aa)
 
  0.870
HMPREF9018_0019
Sua5/YciO/YrdC/YwlC family protein (189 aa)
 
   
  0.795
HMPREF9018_1112
Acyl-CoA thioester hydrolase, YbgC/YbaW family (136 aa)
              0.768
topA
DNA topoisomerase I ; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5’-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3’-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...] (782 aa)
            0.747
HMPREF9018_1111
Uncharacterized protein (432 aa)
 
          0.716
HMPREF9018_1728
ComF family protein (234 aa)
 
 
  0.664
HMPREF9018_1114
Phosphoesterase (183 aa)
              0.623
HMPREF9018_0768
ComEC/Rec2-like protein (523 aa)
 
   
  0.606
rnhB
Ribonuclease HII ; Endonuclease that specifically degrades the RNA of RNA- DNA hybrids (200 aa)
 
          0.534
recA
Recombinase A ; Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage (341 aa)
     
 
  0.491
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 679191
Other names: P. amnii, P. amnii CRIS 21A-A, Prevotella amnii, Prevotella amnii CRIS 21A-A, Prevotella amnii Lawson et al. 2008, Prevotella amnii str. CRIS 21A-A, Prevotella amnii strain CRIS 21A-A
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