STRINGSTRING
HMPREF9018_1119 protein (Prevotella amnii) - STRING interaction network
"HMPREF9018_1119" - Bacterial group 2 Ig-like protein in Prevotella amnii
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HMPREF9018_1119Bacterial group 2 Ig-like protein (1217 aa)    
Predicted Functional Partners:
HMPREF9018_0642
Uncharacterized protein (375 aa)
   
          0.774
HMPREF9018_0391
Phosphatidylinositol-specific phospholipase C, X domain protein (667 aa)
   
          0.760
HMPREF9018_0123
Uncharacterized protein (477 aa)
   
          0.750
HMPREF9018_1997
Uncharacterized protein (366 aa)
   
          0.664
HMPREF9018_1261
Uncharacterized protein (454 aa)
   
          0.620
HMPREF9018_0531
Transposase, IS116/IS110/IS902 family (359 aa)
   
          0.550
HMPREF9018_1463
Uncharacterized protein (99 aa)
   
          0.548
HMPREF9018_1155
Abi-like protein (308 aa)
   
          0.411
HMPREF9018_0236
Uncharacterized protein (413 aa)
   
          0.405
HMPREF9018_0102
ThiF family protein (266 aa)
   
          0.405
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 679191
Other names: P. amnii, P. amnii CRIS 21A-A, Prevotella amnii, Prevotella amnii CRIS 21A-A, Prevotella amnii Lawson et al. 2008, Prevotella amnii str. CRIS 21A-A, Prevotella amnii strain CRIS 21A-A
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