STRINGSTRING
HMPREF9018_1128 protein (Prevotella amnii) - STRING interaction network
"HMPREF9018_1128" - Uncharacterized protein in Prevotella amnii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HMPREF9018_1128Uncharacterized protein (72 aa)    
Predicted Functional Partners:
HMPREF9018_0865
Uncharacterized protein (87 aa)
 
          0.775
HMPREF9018_0362
Integrase (301 aa)
   
          0.755
HMPREF9018_0867
Site-specific recombinase, phage integrase family (375 aa)
   
          0.704
HMPREF9018_0525
Site-specific recombinase, phage integrase family (409 aa)
   
          0.673
HMPREF9018_1127
Uncharacterized protein (135 aa)
            0.662
HMPREF9018_1551
Site-specific recombinase, phage integrase family (409 aa)
   
          0.644
HMPREF9018_1467
Site-specific recombinase, phage integrase family (409 aa)
   
          0.628
HMPREF9018_1533
Uncharacterized protein (139 aa)
   
          0.550
HMPREF9018_1548
Uncharacterized protein (129 aa)
   
          0.537
HMPREF9018_0742
Uncharacterized protein (291 aa)
   
          0.531
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 679191
Other names: P. amnii, P. amnii CRIS 21A-A, Prevotella amnii, Prevotella amnii CRIS 21A-A, Prevotella amnii Lawson et al. 2008, Prevotella amnii str. CRIS 21A-A, Prevotella amnii strain CRIS 21A-A
Server load: low (8%) [HD]