STRINGSTRING
HMPREF9018_1134 protein (Prevotella amnii) - STRING interaction network
"HMPREF9018_1134" - Pseudouridine synthase in Prevotella amnii
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HMPREF9018_1134Pseudouridine synthase (528 aa)    
Predicted Functional Partners:
HMPREF9018_1651
Pseudouridine synthase ; Responsible for synthesis of pseudouridine from uracil (361 aa)
 
  0.912
HMPREF9018_1273
Pseudouridine synthase ; Responsible for synthesis of pseudouridine from uracil (297 aa)
 
  0.855
HMPREF9018_0978
RNA pseudouridine synthase (235 aa)
 
  0.812
truB
tRNA-uridine isomerase ; Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs (233 aa)
 
   
  0.769
asnS
Asparaginyl-tRNA synthetase (463 aa)
   
        0.746
purB
Adenylosuccinase (448 aa)
              0.731
HMPREF9018_1090
Kinase, PfkB family (310 aa)
   
 
    0.712
HMPREF9018_0119
Uracil phosphoribosyltransferase (219 aa)
       
    0.701
der
GTP-binding protein EngA ; GTPase that plays an essential role in the late steps of ribosome biogenesis (437 aa)
 
   
  0.612
HMPREF9018_1632
RNA methyltransferase, RsmD family (176 aa)
   
        0.611
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 679191
Other names: P. amnii, P. amnii CRIS 21A-A, Prevotella amnii, Prevotella amnii CRIS 21A-A, Prevotella amnii Lawson et al. 2008, Prevotella amnii str. CRIS 21A-A, Prevotella amnii strain CRIS 21A-A
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