STRINGSTRING
HMPREF9018_1139 protein (Prevotella amnii) - STRING interaction network
"HMPREF9018_1139" - DHHA1 domain protein in Prevotella amnii
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query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HMPREF9018_1139DHHA1 domain protein (346 aa)    
Predicted Functional Partners:
HMPREF9018_0681
4Fe-4S binding domain protein (77 aa)
       
    0.704
sdhA
Succinate dehydrogenase flavoprotein subunit (634 aa)
       
    0.701
rny
Ribonuclease Y ; Endoribonuclease that initiates mRNA decay (513 aa)
 
   
    0.694
pnp
Polynucleotide phosphorylase ; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3’- to 5’-direction (751 aa)
       
    0.664
HMPREF9018_1140
Uncharacterized protein (303 aa)
            0.661
HMPREF9018_0198
Zinc metalloprotease (466 aa)
 
          0.513
yeaZ
Universal bacterial protein YeaZ (230 aa)
     
      0.493
HMPREF9018_1985
HDIG domain protein (178 aa)
       
    0.491
nusA
Transcription termination/antitermination protein NusA ; Participates in both transcription termination and antitermination (421 aa)
 
        0.479
trpS
Tryptophan--tRNA ligase (362 aa)
 
          0.464
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 679191
Other names: P. amnii, P. amnii CRIS 21A-A, Prevotella amnii, Prevotella amnii CRIS 21A-A, Prevotella amnii Lawson et al. 2008, Prevotella amnii str. CRIS 21A-A, Prevotella amnii strain CRIS 21A-A
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