STRINGSTRING
HMPREF9018_1155 protein (Prevotella amnii) - STRING interaction network
"HMPREF9018_1155" - Abi-like protein in Prevotella amnii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HMPREF9018_1155Abi-like protein (308 aa)    
Predicted Functional Partners:
murE
UDP-N-acetylmuramyl-tripeptide synthetase (485 aa)
            0.706
HMPREF9018_1156
DNA binding domain, excisionase family (102 aa)
 
          0.654
HMPREF9018_0642
Uncharacterized protein (375 aa)
   
          0.654
HMPREF9018_0966
TonB-dependent receptor (780 aa)
   
          0.552
HMPREF9018_1157
Toprim domain protein (687 aa)
              0.525
HMPREF9018_1158
Uncharacterized protein (132 aa)
              0.521
HMPREF9018_1153
Uncharacterized protein (338 aa)
              0.451
HMPREF9018_1154
Uncharacterized protein (201 aa)
              0.448
HMPREF9018_1119
Bacterial group 2 Ig-like protein (1217 aa)
   
          0.411
HMPREF9018_0756
Phosphate-selective porin O and P (384 aa)
   
          0.410
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 679191
Other names: P. amnii, P. amnii CRIS 21A-A, Prevotella amnii, Prevotella amnii CRIS 21A-A, Prevotella amnii Lawson et al. 2008, Prevotella amnii str. CRIS 21A-A, Prevotella amnii strain CRIS 21A-A
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