STRINGSTRING
HMPREF9018_1192 protein (Prevotella amnii) - STRING interaction network
"HMPREF9018_1192" - Uncharacterized protein in Prevotella amnii
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HMPREF9018_1192Uncharacterized protein (785 aa)    
Predicted Functional Partners:
HMPREF9018_1073
TonB-dependent receptor plug domain protein (823 aa)
 
          0.612
HMPREF9018_1896
Uncharacterized protein (396 aa)
   
          0.579
HMPREF9018_0823
Uncharacterized protein (389 aa)
   
          0.563
nrdG
Anaerobic ribonucleoside-triphosphate reductase activating protein (153 aa)
   
          0.563
HMPREF9018_1831
Uncharacterized protein (305 aa)
   
          0.528
nrdD
Anaerobic ribonucleoside-triphosphate reductase (698 aa)
   
          0.507
HMPREF9018_0133
Conjugative transposon TraN protein (291 aa)
   
          0.493
HMPREF9018_0280
Uncharacterized protein (469 aa)
   
          0.460
HMPREF9018_0552
Uncharacterized protein (123 aa)
   
          0.451
HMPREF9018_0881
Uncharacterized protein (494 aa)
   
          0.415
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 679191
Other names: P. amnii, P. amnii CRIS 21A-A, Prevotella amnii, Prevotella amnii CRIS 21A-A, Prevotella amnii Lawson et al. 2008, Prevotella amnii str. CRIS 21A-A, Prevotella amnii strain CRIS 21A-A
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