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STRINGSTRING
EFN92037.1 protein (Prevotella amnii) - STRING interaction network
"EFN92037.1" - annotation not available in Prevotella amnii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFN92037.1annotation not available (860 aa)    
Predicted Functional Partners:
EFN92017.1
annotation not available (388 aa)
 
          0.934
EFN92034.1
Identified by match to protein family HMM PF03372 (349 aa)
 
          0.896
EFN92019.1
annotation not available (458 aa)
 
          0.791
EFN92092.1
annotation not available (130 aa)
   
          0.696
EFN90567.1
annotation not available (226 aa)
   
          0.690
EFN90716.1
Transcription termination/antitermination factor NusG; Identified by match to protein family HMM PF02357 (191 aa)
   
          0.686
EFN90244.1
annotation not available (185 aa)
   
          0.679
EFN90564.1
annotation not available (126 aa)
   
          0.674
EFN91540.1
TonB-dependent receptor; Identified by match to protein family HMM PF03544; match to protein family HMM TIGR01352 (261 aa)
   
  0.673
EFN91114.1
TonB-dependent receptor; Identified by match to protein family HMM PF03544; match to protein family HMM TIGR01352 (294 aa)
   
  0.673
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 679191
Other names: P. amnii CRIS 21A-A, Prevotella amnii, Prevotella amnii CRIS 21A-A, Prevotella amnii str. CRIS 21A-A, Prevotella amnii strain CRIS 21A-A
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