STRINGSTRING
udk protein (Prevotella amnii) - STRING interaction network
"udk" - Uridine monophosphokinase in Prevotella amnii
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
udkUridine monophosphokinase (207 aa)    
Predicted Functional Partners:
HMPREF9018_1010
Putative cytidine deaminase (159 aa)
   
 
  0.982
HMPREF9018_0119
Uracil phosphoribosyltransferase (219 aa)
   
  0.976
pyrH
Uridylate kinase ; Catalyzes the reversible phosphorylation of UMP to UDP (236 aa)
   
 
  0.864
HMPREF9018_1294
Phosphorylase family (291 aa)
     
  0.854
rpe
Ribulose-phosphate 3-epimerase (216 aa)
   
 
  0.844
guaD
Cytidine and deoxycytidylate deaminase zinc-binding region (155 aa)
   
    0.839
tadA
tRNA-specific adenosine deaminase ; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2) (156 aa)
   
    0.836
cmk
Cytidine monophosphate kinase (230 aa)
   
 
  0.821
HMPREF9018_1079
Phosphoribulokinase/uridine kinase family protein (553 aa)
 
 
0.821
pyrF
Orotidine 5’-phosphate decarboxylase (274 aa)
   
 
  0.807
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 679191
Other names: P. amnii, P. amnii CRIS 21A-A, Prevotella amnii, Prevotella amnii CRIS 21A-A, Prevotella amnii Lawson et al. 2008, Prevotella amnii str. CRIS 21A-A, Prevotella amnii strain CRIS 21A-A
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