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hflX protein (Prevotella amnii) - STRING interaction network
"hflX" - GTP-binding protein HflX in Prevotella amnii
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
hflXGTP-binding protein HflX ; GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis (418 aa)    
Predicted Functional Partners:
rplA
50S ribosomal protein L1 ; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release (230 aa)
   
 
  0.815
rplE
50S ribosomal protein L5 ; This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits; this bridge is implicated in subunit movement. Contacts the P site tRNA; the 5S rRNA and some of its associated proteins might help stabilize positioning of ribosome-bound tRNAs (185 aa)
   
 
  0.814
rplB
50S ribosomal protein L2 ; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome (275 aa)
   
 
  0.803
rplQ
50S ribosomal protein L17 (160 aa)
     
 
  0.799
rpmA
50S ribosomal protein L27 (96 aa)
   
      0.795
rplN
50S ribosomal protein L14 ; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome (121 aa)
     
      0.790
rplJ
Ribosomal protein L10 (172 aa)
   
      0.786
rpmI
50S ribosomal protein L35 (65 aa)
     
      0.785
rplX
50S ribosomal protein L24 ; One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit (105 aa)
   
      0.785
rpmH
50S ribosomal protein L34 (51 aa)
     
      0.782
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 679191
Other names: P. amnii, P. amnii CRIS 21A-A, Prevotella amnii, Prevotella amnii CRIS 21A-A, Prevotella amnii Lawson et al. 2008, Prevotella amnii str. CRIS 21A-A, Prevotella amnii strain CRIS 21A-A
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