STRINGSTRING
HMPREF9018_1254 protein (Prevotella amnii) - STRING interaction network
"HMPREF9018_1254" - Bacterial transferase hexapeptide repeat protein in Prevotella amnii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HMPREF9018_1254Bacterial transferase hexapeptide repeat protein (167 aa)    
Predicted Functional Partners:
HMPREF9018_1255
Uncharacterized protein (42 aa)
              0.679
nuoB
NDH-1 subunit B ; NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient (289 aa)
   
    0.509
pgk
Phosphoglycerate kinase (416 aa)
   
 
    0.499
HMPREF9018_1237
Respiratory-chain NADH dehydrogenase, 49 Kd subunit (525 aa)
   
 
  0.486
HMPREF9018_1992
Antioxidant, AhpC/TSA family (278 aa)
     
      0.486
HMPREF9018_1691
Antioxidant, AhpC/TSA family (326 aa)
     
      0.486
HMPREF9018_0758
Antioxidant, AhpC/TSA family (384 aa)
     
      0.486
trxA
Thioredoxin (104 aa)
     
      0.486
pyk
Pyruvate kinase (481 aa)
     
 
    0.480
secD
Export membrane protein SecD ; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA (1008 aa)
              0.452
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 679191
Other names: P. amnii, P. amnii CRIS 21A-A, Prevotella amnii, Prevotella amnii CRIS 21A-A, Prevotella amnii Lawson et al. 2008, Prevotella amnii str. CRIS 21A-A, Prevotella amnii strain CRIS 21A-A
Server load: low (6%) [HD]