• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
EFN90599.1 protein (Prevotella amnii) - STRING interaction network
"EFN90599.1" - Uncharacterized protein in Prevotella amnii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFN90599.1Uncharacterized protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift (52 aa)    
Predicted Functional Partners:
EFN90571.1
Uncharacterized protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift (179 aa)
            0.963
EFN90574.1
Uncharacterized protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift (50 aa)
              0.845
EFN90351.1
Putative DNA-binding protein; Identified by match to protein family HMM TIGR01201 (142 aa)
   
          0.628
EFN90665.1
Putative DNA-binding protein; Identified by match to protein family HMM TIGR01201 (160 aa)
   
          0.592
EFN91800.1
TonB-dependent receptor plug domain protein; Identified by match to protein family HMM PF07715 (823 aa)
   
          0.567
fhs
Formate--tetrahydrofolate ligase; Identified by match to protein family HMM PF01268; Belongs to the formate--tetrahydrofolate ligase family (555 aa)
              0.474
EFN91264.1
annotation not available (408 aa)
   
          0.459
EFN91540.1
TonB-dependent receptor; Identified by match to protein family HMM PF03544; match to protein family HMM TIGR01352 (261 aa)
 
    0.457
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 679191
Other names: P. amnii CRIS 21A-A, Prevotella amnii, Prevotella amnii CRIS 21A-A, Prevotella amnii str. CRIS 21A-A, Prevotella amnii strain CRIS 21A-A
Server load: low (7%) [HD]