STRINGSTRING
HMPREF9018_1273 protein (Prevotella amnii) - STRING interaction network
"HMPREF9018_1273" - Pseudouridine synthase in Prevotella amnii
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
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some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
HMPREF9018_1273Pseudouridine synthase ; Responsible for synthesis of pseudouridine from uracil (297 aa)    
Predicted Functional Partners:
HMPREF9018_1134
Pseudouridine synthase (528 aa)
 
  0.855
coaD
Pantetheine-phosphate adenylyltransferase ; Reversibly transfers an adenylyl group from ATP to 4’- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate (150 aa)
       
    0.800
HMPREF9018_1274
Uncharacterized protein (51 aa)
              0.763
HMPREF9018_1090
Kinase, PfkB family (310 aa)
   
 
    0.711
HMPREF9018_1294
Phosphorylase family (291 aa)
   
 
    0.694
HMPREF9018_1275
Uncharacterized protein (219 aa)
              0.670
HMPREF9018_1272
Uncharacterized protein (43 aa)
              0.659
ribD
Riboflavin biosynthesis protein RibD (313 aa)
   
    0.639
truB
tRNA-uridine isomerase ; Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs (233 aa)
 
   
  0.629
rnc
Ribonuclease III ; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism (266 aa)
 
 
  0.611
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 679191
Other names: P. amnii, P. amnii CRIS 21A-A, Prevotella amnii, Prevotella amnii CRIS 21A-A, Prevotella amnii Lawson et al. 2008, Prevotella amnii str. CRIS 21A-A, Prevotella amnii strain CRIS 21A-A
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