STRINGSTRING
HMPREF9018_1291 protein (Prevotella amnii) - STRING interaction network
"HMPREF9018_1291" - Uncharacterized protein in Prevotella amnii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HMPREF9018_1291Uncharacterized protein (268 aa)    
Predicted Functional Partners:
HMPREF9018_1705
Uncharacterized protein (180 aa)
   
          0.766
HMPREF9018_1296
Uncharacterized protein (306 aa)
   
          0.765
HMPREF9018_0038
Uncharacterized protein (244 aa)
   
          0.754
HMPREF9018_0030
Uncharacterized protein (64 aa)
   
          0.736
HMPREF9018_1382
Uncharacterized protein (191 aa)
   
          0.721
HMPREF9018_0592
Uncharacterized protein (290 aa)
   
          0.681
HMPREF9018_0965
Uncharacterized protein (88 aa)
   
          0.672
HMPREF9018_0727
Uncharacterized protein (150 aa)
   
          0.669
HMPREF9018_0986
Uncharacterized protein (90 aa)
   
          0.667
HMPREF9018_0226
Uncharacterized protein (273 aa)
   
          0.667
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 679191
Other names: P. amnii, P. amnii CRIS 21A-A, Prevotella amnii, Prevotella amnii CRIS 21A-A, Prevotella amnii Lawson et al. 2008, Prevotella amnii str. CRIS 21A-A, Prevotella amnii strain CRIS 21A-A
Server load: low (6%) [HD]