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STRINGSTRING
EFN90660.1 protein (Prevotella amnii) - STRING interaction network
"EFN90660.1" - DGQHR domain protein in Prevotella amnii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFN90660.1DGQHR domain protein; Identified by match to protein family HMM TIGR03187 (394 aa)    
Predicted Functional Partners:
EFN90570.1
annotation not available (528 aa)
 
          0.950
dndD
DNA sulfur modification protein DndD; Identified by match to protein family HMM TIGR03185 (695 aa)
 
          0.947
EFN90682.1
Putative sulfurtransferase DndC; Identified by match to protein family HMM PF01507; match to protein family HMM TIGR03183 (429 aa)
 
          0.923
EFN90584.1
annotation not available (133 aa)
              0.831
EFN90607.1
Divergent AAA domain protein; Identified by match to protein family HMM PF04326 (514 aa)
              0.796
EFN90545.1
DNA-binding helix-turn-helix protein; Identified by match to protein family HMM PF01381 (74 aa)
              0.702
EFN91449.1
annotation not available (859 aa)
   
          0.561
EFN91215.1
annotation not available (1335 aa)
   
          0.500
EFN91237.1
annotation not available (849 aa)
   
          0.490
hincIIM
Site-specific DNA-methyltransferase (Adenine-specific); Identified by match to protein family HMM PF02384 (515 aa)
   
          0.443
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 679191
Other names: P. amnii CRIS 21A-A, Prevotella amnii, Prevotella amnii CRIS 21A-A, Prevotella amnii str. CRIS 21A-A, Prevotella amnii strain CRIS 21A-A
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