STRINGSTRING
HMPREF9018_1339 protein (Prevotella amnii) - STRING interaction network
"HMPREF9018_1339" - Uncharacterized protein in Prevotella amnii
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HMPREF9018_1339Uncharacterized protein (127 aa)    
Predicted Functional Partners:
lspA
Signal peptidase II ; This protein specifically catalyzes the removal of signal peptides from prolipoproteins (221 aa)
 
          0.961
ileS
Isoleucyl-tRNA synthetase ; Catalyzes the attachment of isoleucine to tRNA(Ile). As IleRS can inadvertently accommodate and process structurally similar amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as ’pretransfer’ editing and involves the hydrolysis of activated Val-AMP. The other activity is designated ’posttransfer’ editing and involves deacylation of mischarged Val-tRNA(Ile) (1220 aa)
 
          0.815
HMPREF9018_1704
Uncharacterized protein (73 aa)
   
          0.771
HMPREF9018_0404
Putative zinc ribbon domain protein (274 aa)
 
          0.764
HMPREF9018_0283
Uncharacterized protein (113 aa)
   
          0.708
HMPREF9018_1723
Uncharacterized protein (215 aa)
   
          0.700
yaeT
Outer membrane protein assembly complex, YaeT protein (871 aa)
   
          0.696
HMPREF9018_0194
Uncharacterized protein (199 aa)
   
          0.683
yfiO
Outer membrane assembly lipoprotein YfiO (309 aa)
   
          0.634
hemD
Uroporphyrinogen-III synthase (251 aa)
   
          0.616
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 679191
Other names: P. amnii, P. amnii CRIS 21A-A, Prevotella amnii, Prevotella amnii CRIS 21A-A, Prevotella amnii Lawson et al. 2008, Prevotella amnii str. CRIS 21A-A, Prevotella amnii strain CRIS 21A-A
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