STRINGSTRING
HMPREF9018_1351 protein (Prevotella amnii) - STRING interaction network
"HMPREF9018_1351" - Uncharacterized protein in Prevotella amnii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HMPREF9018_1351Uncharacterized protein (459 aa)    
Predicted Functional Partners:
HMPREF9018_1352
MBOAT family protein (515 aa)
 
          0.916
HMPREF9018_1703
Uncharacterized protein (203 aa)
   
          0.725
HMPREF9018_0622
TonB-dependent receptor (261 aa)
   
          0.610
HMPREF9018_0296
TonB-dependent receptor (294 aa)
   
          0.599
HMPREF9018_1822
Uncharacterized protein (345 aa)
   
          0.584
HMPREF9018_0731
Uncharacterized protein (219 aa)
   
          0.584
HMPREF9018_1353
Uncharacterized protein (686 aa)
              0.545
HMPREF9018_0734
BNR/Asp-box repeat protein (561 aa)
   
          0.539
HMPREF9018_0893
Tetratricopeptide repeat protein (368 aa)
   
          0.526
HMPREF9018_0822
Uncharacterized protein (366 aa)
   
          0.522
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 679191
Other names: P. amnii, P. amnii CRIS 21A-A, Prevotella amnii, Prevotella amnii CRIS 21A-A, Prevotella amnii Lawson et al. 2008, Prevotella amnii str. CRIS 21A-A, Prevotella amnii strain CRIS 21A-A
Server load: low (10%) [HD]