STRINGSTRING
HMPREF9018_1353 protein (Prevotella amnii) - STRING interaction network
"HMPREF9018_1353" - Uncharacterized protein in Prevotella amnii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HMPREF9018_1353Uncharacterized protein (686 aa)    
Predicted Functional Partners:
HMPREF9018_1354
DNA helicase (1140 aa)
 
          0.830
HMPREF9018_1355
Uncharacterized protein (962 aa)
 
          0.787
HMPREF9018_0828
Tetratricopeptide repeat protein (228 aa)
   
          0.777
HMPREF9018_1385
Zinc-dependent metalloproteinase lipoprotein, BF0631 family (357 aa)
   
          0.753
HMPREF9018_0162
Uncharacterized protein (178 aa)
   
          0.746
HMPREF9018_0003
Transporter, major facilitator family protein (391 aa)
   
          0.739
HMPREF9018_0391
Phosphatidylinositol-specific phospholipase C, X domain protein (667 aa)
   
          0.731
HMPREF9018_0072
SusD family protein (450 aa)
   
          0.676
HMPREF9018_1172
Arylsulfatase (578 aa)
   
          0.675
HMPREF9018_1903
Uncharacterized protein (219 aa)
   
          0.642
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 679191
Other names: P. amnii, P. amnii CRIS 21A-A, Prevotella amnii, Prevotella amnii CRIS 21A-A, Prevotella amnii Lawson et al. 2008, Prevotella amnii str. CRIS 21A-A, Prevotella amnii strain CRIS 21A-A
Server load: low (5%) [HD]