STRINGSTRING
HMPREF9018_1370 protein (Prevotella amnii) - STRING interaction network
"HMPREF9018_1370" - Uncharacterized protein in Prevotella amnii
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HMPREF9018_1370Uncharacterized protein (360 aa)    
Predicted Functional Partners:
tdk
Thymidine kinase (196 aa)
              0.811
HMPREF9018_0401
Glutamine amidotransferase, class I (190 aa)
   
      0.747
HMPREF9018_1519
Adenylate kinase (190 aa)
       
    0.664
rsmI
rRNA (cytidine-2’-O-)-methyltransferase RsmI ; Catalyzes the 2’-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA (231 aa)
              0.556
HMPREF9018_1986
HMGL-like protein (592 aa)
 
          0.524
HMPREF9018_1368
Phosphotransferase enzyme family (509 aa)
              0.518
HMPREF9018_1369
Uncharacterized protein (38 aa)
              0.515
ribE
Riboflavin synthase, alpha subunit (201 aa)
       
  0.501
purB
Adenylosuccinase (448 aa)
   
 
    0.497
purC
SAICAR synthetase (316 aa)
            0.495
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 679191
Other names: P. amnii, P. amnii CRIS 21A-A, Prevotella amnii, Prevotella amnii CRIS 21A-A, Prevotella amnii Lawson et al. 2008, Prevotella amnii str. CRIS 21A-A, Prevotella amnii strain CRIS 21A-A
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