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HMPREF9018_1385 protein (Prevotella amnii) - STRING interaction network
"HMPREF9018_1385" - Zinc-dependent metalloproteinase lipoprotein, BF0631 family in Prevotella amnii
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HMPREF9018_1385Zinc-dependent metalloproteinase lipoprotein, BF0631 family (357 aa)    
Predicted Functional Partners:
HMPREF9018_1720
Uncharacterized protein (416 aa)
   
          0.761
HMPREF9018_1353
Uncharacterized protein (686 aa)
   
          0.753
HMPREF9018_0828
Tetratricopeptide repeat protein (228 aa)
   
          0.752
HMPREF9018_1415
Uncharacterized protein (859 aa)
   
          0.672
HMPREF9018_1513
Uncharacterized protein (94 aa)
   
          0.637
HMPREF9018_0072
SusD family protein (450 aa)
   
          0.637
HMPREF9018_0073
TonB-linked outer membrane protein, SusC/RagA family (1032 aa)
   
          0.629
hincIIM
Site-specific DNA-methyltransferase (Adenine-specific) (515 aa)
   
          0.621
HMPREF9018_1386
Uncharacterized protein (126 aa)
 
          0.603
HMPREF9018_0070
Peptidase M16 inactive domain protein (936 aa)
   
          0.578
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 679191
Other names: P. amnii, P. amnii CRIS 21A-A, Prevotella amnii, Prevotella amnii CRIS 21A-A, Prevotella amnii Lawson et al. 2008, Prevotella amnii str. CRIS 21A-A, Prevotella amnii strain CRIS 21A-A
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