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HMPREF9018_1400 protein (Prevotella amnii) - STRING interaction network
"HMPREF9018_1400" - Alpha amylase, catalytic domain protein in Prevotella amnii
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HMPREF9018_1400Alpha amylase, catalytic domain protein (554 aa)    
Predicted Functional Partners:
HMPREF9018_1848
Putative 4-alpha-glucanotransferase (897 aa)
 
   
    0.979
glgP
Alpha-glucan phosphorylase (852 aa)
         
    0.976
HMPREF9018_0593
1,4-alpha-glucan branching enzyme (689 aa)
 
   
    0.806
fabD
Malonyl CoA-acyl carrier protein transacylase (294 aa)
              0.556
HMPREF9018_0033
Uncharacterized protein (507 aa)
   
          0.529
HMPREF9018_1678
Starch synthase (554 aa)
   
   
    0.523
HMPREF9018_1846
Alpha amylase, catalytic domain protein (609 aa)
 
       
0.518
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 679191
Other names: P. amnii, P. amnii CRIS 21A-A, Prevotella amnii, Prevotella amnii CRIS 21A-A, Prevotella amnii Lawson et al. 2008, Prevotella amnii str. CRIS 21A-A, Prevotella amnii strain CRIS 21A-A
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