STRINGSTRING
HMPREF9018_1404 protein (Prevotella amnii) - STRING interaction network
"HMPREF9018_1404" - Uncharacterized protein in Prevotella amnii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HMPREF9018_1404Uncharacterized protein (155 aa)    
Predicted Functional Partners:
HMPREF9018_0033
Uncharacterized protein (507 aa)
   
          0.769
HMPREF9018_1403
Pyridoxal phosphate enzyme, YggS family (223 aa)
              0.738
HMPREF9018_0016
Uncharacterized protein (203 aa)
   
          0.692
HMPREF9018_1940
Uncharacterized protein (586 aa)
   
          0.671
HMPREF9018_1726
Uncharacterized protein (140 aa)
   
          0.660
HMPREF9018_0830
Uncharacterized protein (408 aa)
   
          0.646
HMPREF9018_0201
Uncharacterized protein (382 aa)
   
          0.618
HMPREF9018_0288
GSCFA family protein (269 aa)
   
          0.593
HMPREF9018_1013
Outer membrane protein (167 aa)
   
          0.533
HMPREF9018_1402
Initiator RepB protein (389 aa)
              0.527
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 679191
Other names: P. amnii, P. amnii CRIS 21A-A, Prevotella amnii, Prevotella amnii CRIS 21A-A, Prevotella amnii Lawson et al. 2008, Prevotella amnii str. CRIS 21A-A, Prevotella amnii strain CRIS 21A-A
Server load: low (8%) [HD]