STRINGSTRING
HMPREF9018_1410 protein (Prevotella amnii) - STRING interaction network
"HMPREF9018_1410" - Uncharacterized protein in Prevotella amnii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HMPREF9018_1410Uncharacterized protein (1480 aa)    
Predicted Functional Partners:
HMPREF9018_0879
Sporulation and cell division repeat protein (244 aa)
   
          0.775
HMPREF9018_0885
Uncharacterized protein (479 aa)
   
          0.774
HMPREF9018_1098
Uncharacterized protein (310 aa)
   
          0.760
HMPREF9018_0350
Uncharacterized protein (258 aa)
   
          0.760
HMPREF9018_1018
BNR/Asp-box repeat protein (445 aa)
   
          0.758
HMPREF9018_0687
Uncharacterized protein (282 aa)
   
          0.754
HMPREF9018_2058
LysM domain protein (458 aa)
   
          0.753
HMPREF9018_0583
Uncharacterized protein (528 aa)
   
          0.752
HMPREF9018_0259
Peptidylprolyl isomerase (715 aa)
   
          0.749
HMPREF9018_0162
Uncharacterized protein (178 aa)
   
          0.747
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 679191
Other names: P. amnii, P. amnii CRIS 21A-A, Prevotella amnii, Prevotella amnii CRIS 21A-A, Prevotella amnii Lawson et al. 2008, Prevotella amnii str. CRIS 21A-A, Prevotella amnii strain CRIS 21A-A
Server load: low (7%) [HD]