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STRINGSTRING
EFN90489.1 protein (Prevotella amnii) - STRING interaction network
"EFN90489.1" - Uncharacterized protein in Prevotella amnii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFN90489.1Uncharacterized protein; This gene contains a nucleotide ambiguity which may be the result of a sequencing error (170 aa)    
Predicted Functional Partners:
EFN90487.1
annotation not available (369 aa)
 
          0.798
EFN91981.1
Uncharacterized protein; This gene contains a nucleotide ambiguity which may be the result of a sequencing error (162 aa)
 
          0.795
EFN91252.1
Uncharacterized protein; This gene contains a nucleotide ambiguity which may be the result of a sequencing error (162 aa)
 
          0.793
EFN91445.1
Uncharacterized protein; This gene contains a nucleotide ambiguity which may be the result of a sequencing error (154 aa)
 
          0.793
EFN90186.1
Relaxase/mobilization nuclease domain protein; This gene contains a nucleotide ambiguity which may be the result of a sequencing error; identified by match to protein family HMM PF03432 (354 aa)
 
          0.688
EFN91446.1
Relaxase/mobilization nuclease domain protein; Identified by match to protein family HMM PF03432 (353 aa)
 
          0.683
EFN91450.1
Uncharacterized protein; This gene contains a nucleotide ambiguity which may be the result of a sequencing error (119 aa)
 
          0.680
EFN91444.1
Uncharacterized protein; This gene contains a nucleotide ambiguity which may be the result of a sequencing error (61 aa)
 
          0.674
EFN92131.1
annotation not available (421 aa)
 
          0.666
EFN92121.1
Relaxase/mobilization nuclease domain protein; Identified by match to protein family HMM PF03432 (353 aa)
 
          0.662
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 679191
Other names: P. amnii CRIS 21A-A, Prevotella amnii, Prevotella amnii CRIS 21A-A, Prevotella amnii str. CRIS 21A-A, Prevotella amnii strain CRIS 21A-A
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