STRINGSTRING
HMPREF9018_1453 protein (Prevotella amnii) - STRING interaction network
"HMPREF9018_1453" - Uncharacterized protein in Prevotella amnii
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HMPREF9018_1453Uncharacterized protein (170 aa)    
Predicted Functional Partners:
HMPREF9018_1460
Uncharacterized protein (162 aa)
 
          0.789
HMPREF9018_1462
Uncharacterized protein (162 aa)
 
          0.784
HMPREF9018_1860
Uncharacterized protein (154 aa)
 
          0.783
HMPREF9018_1455
Virulence-associated protein E (369 aa)
 
          0.757
HMPREF9018_1219
Uncharacterized protein (61 aa)
   
          0.716
HMPREF9018_1531
Relaxase/mobilization nuclease domain protein (353 aa)
   
          0.682
HMPREF9018_0656
Relaxase/mobilization nuclease domain protein (354 aa)
   
          0.680
HMPREF9018_1857
Relaxase/mobilization nuclease domain protein (353 aa)
   
          0.671
HMPREF9018_1418
Uncharacterized protein (119 aa)
   
          0.662
HMPREF9018_1465
Relaxase/mobilization nuclease domain protein (353 aa)
   
          0.659
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 679191
Other names: P. amnii, P. amnii CRIS 21A-A, Prevotella amnii, Prevotella amnii CRIS 21A-A, Prevotella amnii Lawson et al. 2008, Prevotella amnii str. CRIS 21A-A, Prevotella amnii strain CRIS 21A-A
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