STRINGSTRING
HMPREF9018_1478 protein (Prevotella amnii) - STRING interaction network
"HMPREF9018_1478" - Peptidase, M23 family in Prevotella amnii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HMPREF9018_1478Peptidase, M23 family (337 aa)    
Predicted Functional Partners:
HMPREF9018_1479
Putative outer membrane protein 40 (405 aa)
 
          0.872
HMPREF9018_1481
Uncharacterized protein (168 aa)
 
          0.718
HMPREF9018_1473
MutS domain I protein (1326 aa)
 
          0.621
atpH
F-type ATPase subunit delta ; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation (179 aa)
 
 
      0.619
HMPREF9018_0151
Uncharacterized protein (511 aa)
   
          0.616
HMPREF9018_1029
Peptidase, S41 family (525 aa)
 
      0.607
HMPREF9018_1855
Peptidase, S41 family (557 aa)
 
      0.607
HMPREF9018_0789
Peptidase, S41 family (537 aa)
 
      0.585
HMPREF9018_2076
Putative plasmid recombination enzyme (503 aa)
   
          0.582
HMPREF9018_1480
Uncharacterized protein (837 aa)
              0.581
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 679191
Other names: P. amnii, P. amnii CRIS 21A-A, Prevotella amnii, Prevotella amnii CRIS 21A-A, Prevotella amnii Lawson et al. 2008, Prevotella amnii str. CRIS 21A-A, Prevotella amnii strain CRIS 21A-A
Server load: low (11%) [HD]