STRINGSTRING
HMPREF9018_1490 protein (Prevotella amnii) - STRING interaction network
"HMPREF9018_1490" - Uncharacterized protein in Prevotella amnii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HMPREF9018_1490Uncharacterized protein (132 aa)    
Predicted Functional Partners:
HMPREF9018_1488
Uncharacterized protein (102 aa)
 
          0.964
HMPREF9018_1489
Toprim domain protein (687 aa)
          0.945
HMPREF9018_1486
Uncharacterized protein (334 aa)
 
          0.832
HMPREF9018_1487
Uncharacterized protein (235 aa)
 
          0.811
HMPREF9018_1156
DNA binding domain, excisionase family (102 aa)
 
          0.751
HMPREF9018_0065
Uncharacterized protein (41 aa)
   
          0.704
HMPREF9018_1157
Toprim domain protein (687 aa)
          0.636
HMPREF9018_1220
Uncharacterized protein (215 aa)
   
          0.628
HMPREF9018_0872
Uncharacterized protein (174 aa)
   
          0.619
HMPREF9018_2032
Uncharacterized protein (88 aa)
   
          0.594
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 679191
Other names: P. amnii, P. amnii CRIS 21A-A, Prevotella amnii, Prevotella amnii CRIS 21A-A, Prevotella amnii Lawson et al. 2008, Prevotella amnii str. CRIS 21A-A, Prevotella amnii strain CRIS 21A-A
Server load: low (5%) [HD]