STRINGSTRING
HMPREF9018_1507 protein (Prevotella amnii) - STRING interaction network
"HMPREF9018_1507" - Response regulator receiver domain protein in Prevotella amnii
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
HMPREF9018_1507Response regulator receiver domain protein (234 aa)    
Predicted Functional Partners:
HMPREF9018_1506
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein (456 aa)
  0.998
HMPREF9018_0853
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein (520 aa)
  0.984
HMPREF9018_0056
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein (471 aa)
  0.976
nifJ
Pyruvate-flavodoxin oxidoreductase ; Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin (1191 aa)
       
  0.866
polA
DNA-directed DNA polymerase (945 aa)
       
  0.861
HMPREF9018_1565
Putative penicillin-binding protein 2 (711 aa)
     
 
  0.842
rplF
50S ribosomal protein L6 ; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center (188 aa)
       
      0.839
rplE
50S ribosomal protein L5 ; This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits; this bridge is implicated in subunit movement. Contacts the P site tRNA; the 5S rRNA and some of its associated proteins might help stabilize positioning of ribosome-bound tRNAs (185 aa)
       
      0.839
rplB
50S ribosomal protein L2 ; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome (275 aa)
       
      0.839
rprY
Transcriptional regulatory protein RprY (235 aa)
 
   
0.803
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 679191
Other names: P. amnii, P. amnii CRIS 21A-A, Prevotella amnii, Prevotella amnii CRIS 21A-A, Prevotella amnii Lawson et al. 2008, Prevotella amnii str. CRIS 21A-A, Prevotella amnii strain CRIS 21A-A
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