STRINGSTRING
HMPREF9018_1516 protein (Prevotella amnii) - STRING interaction network
"HMPREF9018_1516" - Uncharacterized protein in Prevotella amnii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HMPREF9018_1516Uncharacterized protein (64 aa)    
Predicted Functional Partners:
HMPREF9018_1515
AICARFT/IMPCHase bienzyme (393 aa)
              0.810
HMPREF9018_0686
Uncharacterized protein (139 aa)
   
          0.761
HMPREF9018_0601
Uncharacterized protein (222 aa)
   
          0.746
HMPREF9018_0100
Uncharacterized protein (363 aa)
   
          0.712
HMPREF9018_1185
Uncharacterized protein (333 aa)
   
          0.694
HMPREF9018_0509
Uncharacterized protein (159 aa)
   
          0.685
HMPREF9018_1649
Uncharacterized protein (218 aa)
   
          0.674
HMPREF9018_0350
Uncharacterized protein (258 aa)
   
          0.673
HMPREF9018_0592
Uncharacterized protein (290 aa)
   
          0.671
HMPREF9018_0327
Uncharacterized protein (98 aa)
   
          0.664
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 679191
Other names: P. amnii, P. amnii CRIS 21A-A, Prevotella amnii, Prevotella amnii CRIS 21A-A, Prevotella amnii Lawson et al. 2008, Prevotella amnii str. CRIS 21A-A, Prevotella amnii strain CRIS 21A-A
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