STRINGSTRING
HMPREF9018_1533 protein (Prevotella amnii) - STRING interaction network
"HMPREF9018_1533" - Uncharacterized protein in Prevotella amnii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HMPREF9018_1533Uncharacterized protein (139 aa)    
Predicted Functional Partners:
HMPREF9018_1534
Uncharacterized protein (324 aa)
 
          0.902
HMPREF9018_1531
Relaxase/mobilization nuclease domain protein (353 aa)
 
          0.863
HMPREF9018_1752
Uncharacterized protein (133 aa)
   
          0.777
HMPREF9018_1465
Relaxase/mobilization nuclease domain protein (353 aa)
 
          0.775
HMPREF9018_2025
Relaxase/mobilization nuclease domain protein (352 aa)
 
          0.774
HMPREF9018_0551
Relaxase/mobilization nuclease domain protein (353 aa)
 
          0.772
HMPREF9018_0656
Relaxase/mobilization nuclease domain protein (354 aa)
 
          0.767
HMPREF9018_1857
Relaxase/mobilization nuclease domain protein (353 aa)
 
          0.756
HMPREF9018_0097
Uncharacterized protein (131 aa)
   
          0.686
HMPREF9018_1551
Site-specific recombinase, phage integrase family (409 aa)
   
          0.632
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 679191
Other names: P. amnii, P. amnii CRIS 21A-A, Prevotella amnii, Prevotella amnii CRIS 21A-A, Prevotella amnii Lawson et al. 2008, Prevotella amnii str. CRIS 21A-A, Prevotella amnii strain CRIS 21A-A
Server load: low (11%) [HD]